Skip to content

AFNI and NIfTI Server for NIMH/NIH/PHS/DHHS/USA/Earth

Sections
Personal tools
You are here: Home » SSCC » rwcox's Home » Cox's Brain Blog » DTI to measure gradients

DTI to measure gradients DTI to measure gradients

Document Actions
Submitted by bpittman. on 2005-12-21 09:29.
Measuring the gradient fields in MRI is actually tricky, without using some sort of external fiducial object. Here's one way to avoid this problem.

It is relatively easy to make an image of the static magnetic field itself, using two acquisitions with TE shifting. However, making an image of the gradient fields is harder, since the gradients themselves are what is used to make an image in the first place.

One method is to make an image of a fiducial object, something with some spatial structure that has been measured outside the scanner. Then take an image of this object: its distortions will map the gradient field nonlinearities.

Without such an object, another way is to use an internal reference: the diffusion tensor of pure water (OK, water doped with a T1 relaxation agent to make the signal brighter). This tensor has a known value. Now use a DTI sequence to make an image of this tensor. Its deviation from being a spatially constant multiple of the identity is a measure of the nonlinearity of the gradient fields. Noise is a problem, but since the gradient fields are smooth, we could fit them to the DTI data by an expansion in spherical harmonics.

The advantage of this method is that the only phantom required is a bottle of water, the plainer the better. It would be important to make sure the water was still, so the phantom should be placed in the scanner bed carefully and then left for a while (overnight?) to let internal currents damp out. To calibrate the gradients precisely, the temperature of the phantom should be uniform and known, as well. Details, details, details.

This would be a nice M.S. or postbac project, but is probably too small for a Ph.D. project (unless it can be tricked out with more wrinkles).


Blog
« September 2021 »
Su Mo Tu We Th Fr Sa
      1 2 3 4
5 6 7 8 9 10 11
12 13 14 15 16 17 18
19 20 21 22 23 24 25
26 27 28 29 30    
 
 

Powered by Plone

This site conforms to the following standards: