Addresses

 voice : 301-594-9196
 FAX   : 301-402-1370
 e-mail: robertcox@mail.nih.gov
 WWW   : http://afni.nimh.nih.gov

Education

• 1972-1976:   B.S. in Mathematics (with honors)
  California Institute of Technology (Caltech)

• 1984-1988:   Ph.D. in Applied Mathematics
  California Institute of Technology (Caltech)   (Advisor: Donald S. Cohen)
  (awarded the W.P. Carey & Co. Prize in Applied Mathematics for an outstanding doctor's dissertation)

• 1989-1991:   Postdoctoral Fellow
  Computer Research Group   (Mentor: Patrick S. Hagan)
  Los Alamos National Laboratory

Professional and Academic Employment

• 1977-1980:   KPFF Consulting Engineers, Seattle WA
        Computer Programmer
        [Structural Engineering and Finite Element software development]

• 1980-1981:   McDonnell Douglas Astronautics, Huntington Beach CA
        Engineer-Scientist
        [Kalman filtering for satellite guidance; radar systems simulation]

• 1981-1989:   Dynamics Technology, Torrance CA
        Senior Computer Scientist
        [Simulation and data analysis of electromagnetic fields in the ocean;
        Analysis and simulation of radar imaging systems]

• 1991-1993:   Indiana University-Purdue University, Indianapolis IN
        Assistant Professor, Depts. of Mathematical Sciences and of Computer and Information Science

• 1993-2001:   Medical College of Wisconsin, Milwaukee WI
        Biophysics Research Institute
        1993-1994:   Senior Scientist
        1994-1998:   Assistant Professor
        1998-2001:   Associate Professor

• 2001-????:   National Institute of Mental Health, Bethesda MD
        Director, Scientific and Statistical Computing Core, Intramural Research Program
        [Development and support of functional neuroimaging analysis methods]

Invited Lectures and Workshops [since joining NIMH]

• Jun 2001: FMRI training course, Human Brain Mapping meeting, Brighton.
• Jan-Mar 2002: FMRI analysis training course given in 10 lectures and hands-on workshops, NIH.
  (Attended by about 40 researchers from NIMH, NINDS, NIAAA, etc.)
• May 2002: FMRI analysis methods training course, ISMRM annual meeting, Honolulu.
• Sep-Nov 2002: Repeat of FMRI analysis training course from Jan-Mar, NIH.
• Oct 2002: FMRI software workshop at University of Pennsylvania.
• Oct 2002: FMRI course at Medical College of Wisconsin.
• Jan-Apr 2003: Another repeat of FMRI analysis training course, NIH.
• May 2003: Three hour AFNI class in FSL/FreeSurfer course at UCLA.
• July 2003: One day AFNI class at University of Iowa brain mapping workshop.
• Sep 2003: Presentation at Marian Smoluchowski Symposium, Zakopane, Poland.
• Oct 2003: Five day AFNI workshop, Università di Pisa.
• Jan 2004: Three day AFNI workshop, Princeton University.
• Feb 2004: Four day AFNI workshop, NIH.
• May 2004: Educational lecture at ISMRM annual meeting, Kyoto, Japan.
• July 2004: Five day AFNI workshop, NIH.
• Jan 2005: Two seminars at Caltech.
• Feb 2005: Five day AFNI workshop, NIH.
• Aug 2005: Five day AFNI workshop, NIH.
• Sep 2005: Two-and-a-half day AFNI workshop, Aston University; 90 minute presentation at the fMRI Experience symposium in Birmingham UK.
• Mar 2006: Five day AFNI workshop, NIH.
• May 2006: FMRI educational workshop, ISMRM meeting, Seattle.
• Jun 2006: Five day AFNI workshop, Università di Pisa, Italy.
• Sep 2006: Five day AFNI workshop, NIH.
• Jan 2007: Two seminars at UT Houston and Rice University.
• Feb 2007: Five day AFNI workshop, Hanyang University, Seoul.
• Mar 2007: Five day AFNI workshop, NIH.
• May 2007: FMRI educational workshop, ISMRM meeting, Berlin.
• May 2007: Invited presentation, "Clinical FMRI" workshop, Universitätsklinikum Schleswig-Holstein, Kiel Germany.
• Oct 2007: Five day AFNI workshop, NIH.
• Nov 2007: Three day AFNI workshop, NIH. (For students who were wait-listed for the Oct class.)
• Feb 2008: Five day AFNI workshop, NIH.
• Sep 2008: Five day AFNI workshop, NIH.
• Feb 2009: Five day AFNI workshop, NIH.
• Mar 2009: Four day AFNI workshop, Dartmouth University.
• Apr 2009: FMRI educational workshop, ISMRM meeting, Honolulu.
• May 2009: 1/2 day Advanced AFNI workshop, NIH.
• Jul 2009: 1/2 day Advanced AFNI workshop, NIH.
• Jul 2009: Seminar presentation at the Medical College of Wisconsin.
• Aug 2009: Five day AFNI workshop, UC San Diego
• Sep 2009: Four day AFNI workshop, NIH.
• Nov 2009: Five day AFNI workshop, National Cheng Kung University, Tainan, Taiwan.
• Feb 2010: Four day AFNI workshop, NIH.
• Apr 2010: Five day AFNI workshop, Chinese Academy of Sciences, Beijing.
• Apr 2010: Five day AFNI workshop, Southwest University, Chongqing.
• Apr 2010: Invited keynote speaker, First Chinese Conference on Neurotechnology, Chongqing.
• Jun 2010: Five day AFNI workshop, Università di Pisa, Italy.
• Sep 2010: Four day AFNI workshop, NIH. (plus a 1 day makeup class for wait-listers)
• Oct 2010: Five day AFNI workshop, University of Texas Medical School, Houston.
• Feb 2011: Four day AFNI workshop, NIH.
• Apr 2011: Five day AFNI workshop, University of Tulsa.
• May 2011: FMRI educational workshop, ISMRM annual meeting, Montreal.
• Aug 2011: Three day AFNI workshop, Dartmouth College.
• Sep 2011: Four day AFNI workshop, NIH.
• Oct 2011: Five day AFNI workshop, National Cheng Kung University, Tainan, Taiwan.
• Nov 2011: Five day AFNI workshop, Seoul National University Hospital.
• Nov 2011: Two day AFNI workshop, NIH.
• Mar 2012: Four day AFNI workshop, NIH.
• Jun 2012: Educational workshop, Human Brain Mapping conference, Beijing.
• Jun 2012: Five day AFNI workshop, Beijing Normal University.
• Oct 2012: Four day AFNI workshop, NIH.
• Nov 2012: Three day AFNI workshop, NIH.
• Feb 2013: Five day AFNI workshop, NIH.
• Nov 2013: Five day AFNI workshop, Universitatea Babeş-Bolyai, Cluj-Napoca, Romania.
• Nov 2013: Three day AFNI workshop, NIH.
• Dec 2013: Five day AFNI workshop, NIH.
• Apr 2014: Three day AFNI workshop, U Miami Coral Gables.
• May 2014: Educational workshop, ISMRM conference, Milano.
• May 2014: Two day AFNI workshop, Università di Pisa, Italy.
• May 2014: Four day AFNI workshop, Haskins Laboratories, Yale University.
• Sep 2014: Three day AFNI workshop, Dartmouth College.
• Sep 2014: Five day AFNI workshop, NIH.

NIH Review Panels

• May 3 2001: Reviewer for CSR Special Emphasis Panel SSS-Q(02).
• Mar 19 2002: Reviewer for CSR Special Emphasis Panel SSS-E(05).
• Oct 23 2002: Reviewer for Human Brain Project panel SSS-E(95).
• May 26-27 2004: Reviewer for National Centers for Biomedical Computing (Roadmap) CSR Special Emphasis Panel BST-A(55).
• June 9 2004: Member of contract review panel LXF-L(54) for NIDA IRP.
• Dec 13 2004: Reviewer for Bioengineering Research Partnerships CSR Special Emphasis Panel BST-A(50).
• Nov 10 2005: Reviewer for Human Brain Project Neurotechnology/Engineering CSR Special Emphasis Panel MDCN-K(55).
• Jun 21 2006: Reviewer for Neuroinformatics/Imaging CSR Special Emphasis Panel MDCN-K(51).
• Jun 27 2006: Chair of contract review panel for NIBIB ERP (Neuroscience Blueprint) for NITRC.
• Oct 31 2006: Reviewer for Neuroinformatics/Imaging CSR Special Emphasis Panel MDCN-K(52).
• Jun 4-5 2009: Reviewer for CSR Neurotechnology Study Section.
• Jun 2010: Mail-in reviewer for CSR Neurotechnology Study Section.
• Oct 12-13 2010: Reviewer for CSR Neurotechnology Overflow Study Section.
• Jun 9-10 2011: Reviewer for CSR Neurotechnology NT-L Study Section.

Refereed Publications

1. RW Cox and DS Cohen.
   A mathematical model for stress-driven diffusion in polymers.
   Journal of Polymer Science, Polymer Physics Edition, 27: 589-602, 1989.
       N.B.: This paper has been cited 25 times [by May 2014].

2. RW Cox.
   Shocks in a model for stress-driven diffusion.
   SIAM Journal on Applied Mathematics, 50: 1284-1299, 1990.
       N.B.: This paper has been cited 7 times [by May 2014].

3. PS Hagan and RW Cox.
   Productivity enhancement in hydrofractured oil reservoirs.
   European Journal of Applied Mathematics, 1: 26-46, 1990.

4. RW Cox.
   Stress-assisted diffusion: a free boundary problem.
   SIAM Journal on Applied Mathematics, 51: 1522-1537, 1991.
       N.B.: This paper has been cited 1 time [by May 2014].

5. RW Cox, A Jesmanowicz, and JS Hyde.
   Real-time functional magnetic resonance imaging.
   Magnetic Resonance in Medicine, 33: 230-236, 1995.
       N.B.: This paper has been cited 152 times [by Jan 2015].
6. EC Wong, RW Cox, and AW Song.
   Optimized isotropic diffusion weighting.
   Magnetic Resonance in Medicine, 34: 139-143, 1995.
       N.B.: This paper has been cited 76 times [by Jan 2015].
7. EA DeYoe, GJ Carman, PA Bandettini, S Glickman, J Wieser, RW Cox, D Miller, and J Neitz.
   Mapping striate and extrastriate visual areas in human cerebral cortex.
   Proceedings of the National Academy of Sciences of the USA, 93: 2382-2386, 1996.
       N.B.: This paper has been cited 637 times [by Jan 2015].

8. RW Cox.
   AFNI: Software for analysis and visualization of functional magnetic resonance neuroimages.
   Computers and Biomedical Research, 29: 162-173, 1996.
       N.B.: This paper has been cited 3557 times [by Jan 2015].
     •   For further information about the AFNI software package, see http://afni.nimh.nih.gov/afni

9. FZ Yetkin, TL Mcauliffe, RW Cox, and VM Haughton.
   Test-retest precision of functional MR in sensory and motor task activation.
   American Journal of Neuroradiology, 17: 95-98, 1996.
       N.B.: This paper has been cited 101 times [by Jan 2015].

10. O Yetkin, FZ Yetkin, VM Haughton, and RW Cox.
    Use of functional MR to map language in multilingual volunteers.
    American Journal of Neuroradiology, 17: 473-477, 1996.
        N.B.: This paper has been cited 65 times [by Jan 2015].

11. A Li, FZ Yetkin, RW Cox, and VM Haughton.
    Ipsilateral hemisphere activation during motor and sensory tasks.
    American Journal of Neuroradiology, 17: 651-655, 1996.
        N.B.: This paper has been cited 70 times [by Jan 2015].

12. FZ Yetkin, VM Haughton, RW Cox, JS Hyde, RM Birn, EC Wong, and R Prost.
    Effect of motion outside the field of view on functional MR.
    American Journal of Neuroradiology, 17: 1005-1009, 1996.
        N.B.: This paper has been cited 53 times [by Jan 2015].

13. JR Binder, JA Frost, TA Hammeke, SM Rao, and RW Cox.
    Function of the left planum temporale in auditory and linguistic processing.
    Brain, 119: 1239-1247, 1996.
        N.B.: This paper has been cited 283 times [by Jan 2015].

14. WM Mueller, FZ Yetkin, TA Hammeke, GL Morris, SJ Swanson, K Reichert, RW Cox, and VM Haughton.
    Functional magnetic resonance imaging mapping of the motor cortex in patients with cerebral tumors.
    Neurosurgery, 39: 515-520, 1996.
        N.B.: This paper has been cited 178 times [by Jan 2015].

15. JR Binder, JA Frost, TA Hammeke, RW Cox, SM Rao, and T Prieto.
    Human brain language areas identified by functional magnetic resonance imaging.
    Journal of Neuroscience, 17: 353-362, 1997.
        N.B.: This paper has been cited 788 times [by Jan 2015].

16. SM Rao, JA Bobholz, TA Hammeke, AC Rosen, SJ Woodley, JM Cunningham, RW Cox, EA Stein, and JR Binder.
    Functional MRI evidence for subcortical participation in conceptual reasoning skills.
    NeuroReport, 8: 1987-1993, 1997.
        N.B.: This paper has been cited 94 times [by Jan 2015].

17. SM Rao, DL Harrington, KY Haaland, JA Bobholz, RW Cox, and JR Binder.
    Distributed neural systems underlying the timing of movements.
    Journal of Neuroscience, 17: 5528-5535, 1997.
        N.B.: This paper has been cited 381 times [by May 2014].

18. R Zhang, RW Cox, and JS Hyde.
    The effect of magnetization transfer on functional MRI signals.
    Magnetic Resonance in Medicine, 38: 187-192, 1997.
        N.B.: This paper has been cited 9 times [by Jan 2015].

19. MS Beauchamp, RW Cox, and EA DeYoe.
    Graded effects of spatial and featural attention on human area MT and associated motion processing areas.
    Journal of Neurophysiology, 78: 516-520, 1997.
        N.B.: This paper has been cited 195 times [by Jan 2015].

20. FZ Yetkin, WM Mueller, GL Morris, TL Mcauliffe, JL Ulmer, RW Cox, DL Daniels, and VM Haughton.
    Functional MR activation correlated with intraoperative cortical mapping.
    American Journal of Neuroradiology, 18: 1311-1315, 1997.
        N.B.: This paper has been cited 167 times [by Jan 2015].

21. RW Cox and JS Hyde.
    Software tools for analysis and visualization of FMRI Data.
    NMR in Biomedicine, 10: 171-178, 1997.
        N.B.: This paper has been cited 329 times [by Jan 2015].

22. RM Birn, PA Bandettini, A Jesmanowicz, RW Cox, and R Shaker.
    Magnetic field changes in the human brain due to swallowing or speaking.
    Magnetic Resonance in Medicine, 40: 55-60, 1998.
        N.B.: This paper has been cited 104 times [by Jan 2015].

23. JS Hyde, HS Mchaourab, TG Camenisch, JJ Ratke, RW Cox, and W Froncisz.
    Electron paramagnetic resonance detection by time-locked subsampling.
    Review of Scientific Instruments, 69: 2622-2628, 1998.
        N.B.: This paper has been cited 21 times [by Jan 2015].

24. MK Kern, RM Birn, S Jaradeh, A Jesmanowicz, RW Cox, JS Hyde, and R Shaker.
    Identification and characterization of cerebral cortical response to esophageal mucosal acid exposure.
    Gastroenterology, 115: 1353-1362, 1998.
        N.B.: This paper has been cited 78 times [by May 2014].

25. KM Donahue, J Van Kylen, S Guven, A El-Bershawi, W-M Luh, PA Bandettini, RW Cox, JS Hyde, and AH Kissebah.
    Simultaneous gradient-echo/spin-echo EPI of graded ischemia in human skeletal muscle.
    Journal of Magnetic Resonance Imaging, 8: 1106-1113, 1998.
        N.B.: This paper has been cited 40 times [by Jan 2015].
26. FZ Yetkin, JL Ulmer, W Mueller, RW Cox, MM Klosek, and VM Haughton.
    Functional magnetic resonance imaging assessment of the risk of postoperative hemiparesis after excision of cerebral tumors.
    International Journal of Neuroradiology, 4: 253-257, 1998.
        N.B.: This paper has been cited 9 times [by May 2014].

27. RM Birn, PA Bandettini, RW Cox, and R Shaker.
    Event-related FMRI of tasks involving brief motion.
    Human Brain Mapping, 7: 106-114, 1999.
        N.B.: This paper has been cited 176 times [by Jan 2015].

28. R Tong and RW Cox.
    Rotation of NMR images using the 2D chirp-z transform.
    Magnetic Resonance in Medicine, 41: 253-256, 1999.
        N.B.: This paper has been cited 20 times [by Jan 2015].

29. JA Frost, JR Binder, JA Springer, TA Hammeke, PSF Bellgowan, SM Rao, and RW Cox.
    Language processing is strongly left lateralized in both sexes - evidence from functional MRI.
    Brain, 122 (part 2): 199-208, 1999.
        N.B.: This paper has been cited 265 times [by Jan 2015].

30. JR Binder, JA Frost, TA Hammeke, PSF Bellgowan, SM Rao, and RW Cox.
    Conceptual processing during the conscious resting state: a functional MRI study.
    Journal of Cognitive Neuroscience, 11: 80-95, 1999.
        N.B.: This paper has been cited 559 times [by Jan 2015].

31. B Crosson B, SM Rao, SJ Woodley, AC Rosen, TA Hammeke, JA Bobholz, A Mayer, JM Cunningham, SA Fuller, JR Binder, RW Cox, and EA Stein.
    Mapping of semantic, phonological, and orthographic verbal working memory in normal adults with FMRI.
    Neuropsychology, 13: 171-187, 1999.
        N.B.: This paper has been cited 73 times [by Jan 2015].

32. RW Cox and R Tong.
    Two and three dimensional image rotation using the FFT.
    IEEE Transactions on Image Processing, 8: 1297-1299, 1999.
        N.B.: This paper has been cited 22 times [by Jan 2015].

33. MM Klosek and RW Cox.
    Steady-state currents in sharp stochastic ratchets.
    Physical Review E, 60: 3727-3735, 1999.
        N.B.: This paper has been cited 10 times [by Jan 2015].

34. RW Cox and A Jesmanowicz.
    Real-time 3D image registration for functional MRI.
    Magnetic Resonance in Medicine, 42: 1014-1018, 1999.
        N.B.: This paper has been cited 434 times [by Jan 2015].
35. RW Cox.
    k-space partition diagrams: a graphical tool for analysis of MRI pulse sequences.
    Magnetic Resonance in Medicine, 43: 160-162, 2000.
        N.B.: This paper has never been cited -- and it was such a nice idea, too.

36. DL Harrington, SM Rao, KY Haaland, JA Bobholz, AR Mayer, JR Binder, and RW Cox.
    Specialized neural systems underlying representations of movements.
    Journal of Cognitive Neuroscience, 12: 56-77, 2000.
        N.B.: This paper has been cited 120 times [by Jan 2015].
37. PA Bandettini and RW Cox.
    Event-related fMRI contrast when using constant interstimulus interval: theory and experiment.
    Magnetic Resonance in Medicine, 43: 540-548, 2000.
        N.B.: This paper has been cited 129 times [by Jan 2015].
38. ZS Saad, KM Ropella, RW Cox, and EA DeYoe.
    Analysis and use of FMRI response delays.
    Human Brain Mapping, 13: 74-93, 2001.
        N.B.: This paper has been cited 96 times [by Jan 2015].
39. GE Sarty, R Bennett, and RW Cox.
    Direct reconstruction of non-Cartesian k-space data using a non-uniform fast Fourier transform.
    Magnetic Resonance in Medicine, 45: 908-915, 2001.
        N.B.: This paper has been cited 31 times [by Jan 2015].
40. MK Kern, RM Birn, S Jaradeh, A Jesmanowicz, RW Cox, JS Hyde, and R Shaker.
    Swallow-related cerebral cortical activity maps are not specific to deglutition.
    American Journal of Physiology-Gastrointestinal and Liver Physiology, 280: G531-G538, 2001.
        N.B.: This paper has been cited 56 times [by Jan 2015].

41. RM Birn, RW Cox, and PA Bandettini.
    Detection versus estimation in event-related fMRI: choosing the optimal stimulus timing.
    NeuroImage, 15: 252-264, 2002.
        N.B.: This paper has been cited 118 times [by Jan 2015].

42. V Roopchansingh, RW Cox, A Jesmanowicz, BD Ward, and JS Hyde.
    Single-shot magnetic field mapping and applications.
    Magnetic Resonance in Medicine, 50: 839-843, 2003.
        N.B.: This paper has been cited 25 times [by Jan 2015].

43. RM Birn, RW Cox, and PA Bandettini.
    Experimental designs and processing strategies for fMRI studies involving overt verbal responses.
    NeuroImage, 23: 1046-1058, 2004.   http://dx.doi.org/10.1016/j.neuroimage.2004.07.039
        N.B.: This paper has been cited 85 times [by Jan 2015].
44. ZS Saad, RC Reynolds, B Argall, S Japee, and RW Cox.
    SUMA: An interface for surface-based intra- and inter-subject analysis with AFNI.
    2004 2nd IEEE International Symposium on Biomedical Imaging: Macro to Nano 2, pp1510-1513.
        N.B.: This paper has been cited 60 times [by Jan 2015].
45. ZS Saad, G Chen, RC Reynolds, PP Christidis, KR Hammett, PSF Bellgowan, and RW Cox.
    FIAC Analysis According to AFNI and SUMA.
    Human Brain Mapping, 27: 417-424, 2006.   http://dx.doi.org/10.1002/hbm.20247
        N.B.: This paper has been cited 33 times [by Jan 2015].
46. ZS Saad, DR Glen, G Chen, MS Beauchamp, R Desai, and RW Cox.
    A new method for improving functional-to-structural MRI alignment using local Pearson correlation.
    NeuroImage, 44: 839-848, 2009.   http://dx.doi.org/10.1016/j.neuroimage.2008.09.037
        N.B.: This paper has been cited 108 times [by Jan 2015].
47. H Sarin, AS Kanevsky, SH Fung, JA Butman, RW Cox, D Glen, R Reynolds, and S Auh.
    Metabolically stable bradykinin B2 receptor agonists enhance transvascular drug delivery into malignant brain tumors by increasing drug half-life.
    Journal of Translational Medicine, 7: #33, 2009.   http://dx.doi.org/10.1186/1479-5876-7-33
        N.B.: This paper has been cited 11 times [by Jan 2015].
48. JH Kim, JM Lee, HJ Jo, SH Kim, JH Lee, ST Kim, SW Seo, RW Cox, DL Na, SI Kim, and ZS Saad.
    Defining functional SMA and pre-SMA subregions in human MFC using resting state fMRI: functional connectivity-based parcellation method.
    NeuroImage 49: 2375-2386, 2010.   http://dx.doi.org/10.1016/j.neuroimage.2009.10.016
        N.B.: This paper has been cited 63 times [by Jan 2015].
49. HJ Jo, ZS Saad, WK Simmons, LA Milbury, and RW Cox.
    Mapping sources of correlation in resting state FMRI, with artifact detection and removal.
    NeuroImage, 52: 571-582, 2010.   http://dx.doi.org/10.1016/j.neuroimage.2010.04.246
        N.B.: This paper has been cited 44 times [by May 2014].
50. A Vovk, RW Cox, J Stare, D Šuput, and ZS Saad.
    Segmentation Priors From Local Image Properties: Without Using Bias Field Correction, Location-based Templates, or Registration.
    Neuroimage, 55: 142-152, 2011.   http://dx.doi.org/10.1016/j.neuroimage.2010.11.082
        N.B.: This paper has been cited 5 times [by Jan 2015].
51. A Vovk, RW Cox, D Šuput, J Stare, and ZS Saad.
    Uporaba statističnih podpisov za izdelavo verjetnostnih map zdravih in obolelih možganov - nov diagnostični pripomoček?
    (Use of signatures to create probability maps of brain tissues in health and disease – a new diagnostic tool?)
    Zdrav Vestn, 80: 476-482, 2011.
        N.B.: This paper has been cited 1 time [by Jan 2015].
52. G Chen, ZS Saad, DR Glen, JP Hamilton, ME Thomason, IH Gotlib, and RW Cox.
    Vector Autoregression, Structural Equation Modeling, and Their Synthesis in Neuroimaging Data Analysis.
    Computers in Biology and Medicine, 41: 1142-1155, 2011.     http://dx.doi.org/10.1016/j.compbiomed.2011.09.004
        N.B.: This paper has been cited 12 times [by Jan 2015].
53. RW Cox.
    AFNI: what a long strange trip it's been.
    NeuroImage, 60: 747-765, 2012.   http://dx.doi.org/10.1016/j.neuroimage.2011.08.056
        N.B.: This paper has been cited 26 times [by Jan 2015].
54. G Chen, ZS Saad, AR Nath, MS Beauchamp, and RW Cox.
    FMRI Group Analysis Combining Effect Estimates and Their Variances.
    Neuroimage, 60: 747–765, 2012.   http://dx.doi.org/10.1016/j.neuroimage.2011.12.060
        N.B.: This paper has been cited 19 times [by Jan 2015].
55. ZS Saad, SJ Gotts, K Murphy, G Chen, HJ Jo, A Martin, and RW Cox.
    Trouble at Rest: How Correlation Patterns and Group Differences Become Distorted After Global Signal Regression.
    Brain Connectivity, 2: 25-32, 2012.   http://dx.doi.org/10.1089/brain.2012.0080
56. SJ Gotts, WK Simmons, LA Milbury, GL Wallace, RW Cox, and A Martin.
    Fractionation of Social Brain Circuits in Autism Spectrum Disorders.
    Brain, 135: 2711-2725, 2012.   http://dx.doi.org/10.1093/brain/aws160
        N.B.: This paper has been cited 44 times [by Jan 2015].
57. HJ Jo, ZS Saad, SJ Gotts, A Martin, and RW Cox.
    Quantifying Agreement between Anatomical and Functional Interhemispheric Correspondences in the Resting Brain.
    PLoS ONE, 7: art.&nbps;no. e48847, 2012.   http://dx.doi.org/10.1371/journal.pone.0048847
        N.B.: This paper has been cited 6 times [by Jan 2015].
58. G Chen, ZS Saad, JC Britton, DS Pine, and RW Cox
    Linear mixed-effects modeling approach to FMRI group analysis.
    NeuroImage, 73: 176-190, 2013.
        N.B.: This paper has been cited 12 times [by Jan 2015].
59. SJ Gotts, ZS Saad, HJ Jo, GL Wallace, RW Cox, and A Martin.
    The perils of global signal regression for group comparisons: A case study of Autism Spectrum Disorders.
    Frontiers in Human Neuroscience: (JUL), article number 356, 2013.
        N.B.: This paper has been cited 20 times [by Jan 2015].
60. HJ Jo, SJ Gotts, RC Reynolds, PA Bandettini, A Martin, RW Cox, and ZS Saad.
    Effective preprocessing procedures virtually eliminate distance-dependent motion artifacts in resting state FMRI.
    Journal of Applied Mathematics:  article number 935154, 2013. http://www.ncbi.nlm.nih.gov/pubmed/24415902
        N.B.: This paper has been cited 11 times [by Jan 2015].
61. SJ Gotts, HJ Jo, GL Wallace, ZS Saad, RW Cox, and A Martin.
    Two distinct forms of functional lateralization in the human brain.
    Proceedings of the National Academy of Sciences of the United States of America, 110: E3435-E3444, 2013.
        N.B.: This paper has been cited 12 times [by Jan 2015].
62. ZS Saad, RC Reynolds, HJ Jo, SJ Gotts, G Chen, A Martin, and RW Cox.
    Correcting Brain-Wide Correlation Differences in Resting-State FMRI.
    Brain Connectivity, 2013: 339-352.
63. G Chen, NE Adleman, ZS Saad, E Leibenluft, and RW Cox.
    Applications of Multivariate Modeling to Neuroimaging Group Analysis: A Comprehensive Alternative to the Univariate General Linear Model.
    NeuroImage, 99: 571-588, 2014.   http://dx.doi.org/10.1016/j.neuroimage.2014.06.027
64. J Gonzalez-Castillo, CW Hoy, DA Handwerker, V Roopchansingh, SJ Inati, ZS Saad, RW Cox, and PA Bandettini.
    Task Dependence, Tissue Specificity, and Spatial Distribution of Widespread Activations in Large Single-Subject Functional MRI Datasets at 7 T.
    Cerebral Cortex, in press.   http://dx.doi.org/10.1093/cercor/bhu148
65. B Biswal, C Pawela, T Grist, ME Meyerand, AS Nencka, EA DeYoe, SJ Li, DB Rowe, V Kiviniemi, RW Cox, J Bodurka, S Ogawa, A Koretsky, X Hu, SG Kim.
    Personal reflections on James S. Hyde.
    Brain Connectivity, 4: 631-635, 2014.

Recent Conference Presentations

• RW Cox, ZS Saad, G Chen, DR Glen, and RC Reynolds
  New Tools for Analysis of MRI Datasets.
  ISMRM Annual Meeting, April 2009, Honolulu.
• RW Cox, and ZS Saad.
  Surfing the Connectome: InstaCorr in AFNI and SUMA.
  Human Brain Mapping Annual Meeting, June 2010, Barcelona; and
  Second Biennial International Conference on Resting State Connectivity, September 2010, Milwaukee.
• RW Cox.
  Functional MRI Analysis. (Morning session educational oral presentation.)
  ISMRM Annual Meeting, May 2011, Montreal.
• RW Cox, RC Reynolds, DR Glen, ZS Saad, G Chen.
  AFNI: State of the Software - 2012.
  Human Brain Mapping Annual Meeting, June 2012, Beijing.
• RW Cox and DR Glen.
  Nonlinear Warping in AFNI.
  Human Brain Mapping Annual Meeting, June 2013, Seattle.
• RW Cox.
  FMRI Analysis Methods: Classics and New Trends
  ISMRM Annual Meeting, May 2014, Milano.

Doctoral Dissertations Supervised

1. Rongyan Zhang.
   Functional MRI Studies Using Magnetization Transfer,
   September 1998.
   [Current Position: Senior Scientist, Medical College of Wisconsin]

2. Rasmus Matthias Birn.
   Functional Magnetic Resonance Imaging in the Presence of Task-Induced Motion,
   October 1999.
   [Current Position: Assistant Professor, University of Wisconsin]

3. Raoqiong Tong Bennett.
   Power Spectral Density Imaging Beyond the Nyquist Limit,
   December 2000.
   [Current Position: Law student, Arizona State University]

Funding History

• 5R29NS034798 - INTERACTIVE AND REAL-TIME FUNCTIONAL MR NEUROIMAGING (PI) - 1996-2001

Miscellaneous

• May 2006: Outstanding Teacher Award for educational presentation at ISMRM annual meeting.
• July 2007: The Blueprint for Neuroscience Research Director's Award

Erdös Number = 4